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Bioinformatics for evolutionary biologists : a problems approach / Bernhard Haubold, Angelika Börsch-Haubold.

By: Contributor(s): Material type: TextTextLanguage: English Publisher: Cham, Switzerland : Springer International Publishing AG, [2017]Description: x, 318 pages : illustrations (some color) ; 24 cmContent type:
  • text
Media type:
  • unmediated
Carrier type:
  • volume
ISBN:
  • 9783319673943 (alk. paper)
  • 3319673947 (alk. paper)
Subject(s): DDC classification:
  • 570.285 23
LOC classification:
  • QH324.2 .H378 2017
NLM classification:
  • 2018 F-256
  • QU 26.5
Online resources:
Contents:
The UNIX command line -- Constructing and applying optimal alignments -- Exact matching -- Fast allignment -- Evolution between species: phylogeny -- Evolution within populations -- Additional topics -- Answers -- Appendix. UNIX guide -- References -- Index.
Summary: "This self-contained textbook covers fundamental aspects of sequence analysis in evolutionary biology, including sequence alignment, phylogeny reconstruction, and coalescent simulation. It addresses these aspects through a series of over 400 computer problems, ranging from elementary to research level to enable learning by doing. Students solve the problems in the same computational environment used for decades in science -- the UNIX command line. This is available on all three major operating systems for PCs: Microsoft Windows, Mac-OSX, and Linux. To learn using this powerful system, students analyze sample sequence data by applying generic tools, bioinformatics software, and over 40 programs specifically written for this course. The solutions for all problems are included, making the book ideal for self-study. Problems are grouped into sections headed by an introduction and a list of new concepts and programs. By using practical computing to explore evolutionary concepts and sequence data, the book enables readers to tackle their own computational problems" -- Back cover.
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Holdings
Item type Current library Call number Status
Цахим ном Цахим ном Эрдэм шинжилгээний номын сан 570.285 Available

Includes bibliographical references (pages 309-311) and index.

The UNIX command line -- Constructing and applying optimal alignments -- Exact matching -- Fast allignment -- Evolution between species: phylogeny -- Evolution within populations -- Additional topics -- Answers -- Appendix. UNIX guide -- References -- Index.

"This self-contained textbook covers fundamental aspects of sequence analysis in evolutionary biology, including sequence alignment, phylogeny reconstruction, and coalescent simulation. It addresses these aspects through a series of over 400 computer problems, ranging from elementary to research level to enable learning by doing. Students solve the problems in the same computational environment used for decades in science -- the UNIX command line. This is available on all three major operating systems for PCs: Microsoft Windows, Mac-OSX, and Linux. To learn using this powerful system, students analyze sample sequence data by applying generic tools, bioinformatics software, and over 40 programs specifically written for this course. The solutions for all problems are included, making the book ideal for self-study. Problems are grouped into sections headed by an introduction and a list of new concepts and programs. By using practical computing to explore evolutionary concepts and sequence data, the book enables readers to tackle their own computational problems" -- Back cover.

English

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